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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60186708_60189594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60186708 - 60189594

Intron Length:

2887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCTATGTTGATC

Flanking Amino Acid:

AFLSDNVVLLRSRPVITMDI

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.7

29.4

Major BPS

74.6

0.61

1.4

34.5

Major PPT

72.5

0.51

0.9

63.4

43.1

Minor 5ss

33.8

-1.8

42.5

44.5

Minor BPS

-0.1

2.1

61.13

39.1

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393

ENSAPLT00000027172

60138664 - 60345030

206367