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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60196328_60258489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60196328 - 60258489

Intron Length:

62162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CTTTCTTTTACA

Flanking Amino Acid:

KCEHYLAYVKRRVKDVISPI

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.7

33.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

91.9

0.94

0.6

87.1

23.5

Minor 5ss

35.9

-1.6

2.6

42.5

44.2

Minor BPS

70.8

0.65

1.6

78.96

37.6

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027172

60138664 - 60345030

206367

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393