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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60320410_60323162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60320410 - 60323162

Intron Length:

2753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATACACT

Flanking Amino Acid:

LFQSLNFTLQVYNAGPSTLP

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.8

0.72

0.8

77.2

36.3

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

49.3

0.02

2.3

80.31

41.8

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393

ENSAPLT00000027172

60138664 - 60345030

206367