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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60338258_60338835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60338258 - 60338835

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATATTT

Flanking Amino Acid:

FFTKSGRKVLDCERPGRSCL

Intron Amino Acid Position:

882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.65

0.8

74.6

35.4

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

66.8

0.6

1.9

89.01

35.8

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022219

60138664 - 60341970

203307

ENSAPLT00000047763

60138664 - 60345030

206367

ENSAPLT00000022111

60138664 - 60341624

202961

ENSAPLT00000042496

60138664 - 60367056

228393

ENSAPLT00000009697

60138664 - 60368013

229350

ENSAPLT00000038537

60138664 - 60367056

228393

ENSAPLT00000027172

60138664 - 60345030

206367