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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60340688_60366957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60340688 - 60366957

Intron Length:

26270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTGATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGTTACTTACCA

Flanking Amino Acid:

VPNGSPEEKPMGFFRRRYKE

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.9

0.83

0.8

80.7

35.9

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

64.8

0.46

1.8

77.36

39.2

Associated Gene:

Gene:

ITGA9

Ensembl Gene ID:

ENSAPLG00000009236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042496

60138664 - 60367056

228393