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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60441037_60441205_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60441037 - 60441205

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGATTGT

5'SS Class:

major

3'SS Sequence:

GGATCAAATTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

AAAGGATCAAAT

Flanking Amino Acid:

MKNPESFSKRQEANARER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

62.6

41.6

Major BPS

68.5

0.46

73.3

28.9

Major PPT

58.4

0.19

1.1

45.1

Minor 5ss

31.3

-2.1

4.2

48.1

Minor BPS

38.5

-0.8

2.1

51.68

41.8

Associated Gene:

Gene:

NEUROD6

Ensembl Gene ID:

ENSAPLG00000009187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009555

60440191 - 60441231

1041