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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60648536_60648839_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60648536 - 60648839

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

AGTGCAAAAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

AGTGCAAAAATA

Flanking Amino Acid:

REKWKAQATKAVKAFLEIGY

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.9

37.4

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

48.3

-0.1

38.7

37.6

Minor 5ss

37.2

-1.4

3.4

51.6

45.1

Minor BPS

41.3

-0.6

2.1

52.61

39.4

Associated Gene:

Gene:

PDE1C

Ensembl Gene ID:

ENSAPLG00000008225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034604

60648357 - 60815817

167461