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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60662071_60670679_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60662071 - 60670679

Intron Length:

8609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

CGCCATCCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CTTCTCTCATCA

Flanking Amino Acid:

ILSNLSKDDWREFRALVIEM

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

49.8

-0

1.1

48.8

32.9

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

49.7

-0

1.8

64.59

41.9

Associated Gene:

Gene:

PDE1C

Ensembl Gene ID:

ENSAPLG00000008225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008604

60648193 - 60815817

167625

ENSAPLT00000047205

60648193 - 60815817

167625

ENSAPLT00000034604

60648357 - 60815817

167461