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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60683209_60684560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60683209 - 60684560

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTACTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCATTTTTAATT

Flanking Amino Acid:

TRYDLINRFKIPISALVSFV

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.4

0.71

0.8

31.7

Minor 5ss

32.9

-2

2.7

43.5

Minor BPS

72.8

0.79

1.1

79.64

37.1

Associated Gene:

Gene:

PDE1C

Ensembl Gene ID:

ENSAPLG00000008225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047205

60648193 - 60815817

167625

ENSAPLT00000034604

60648357 - 60815817

167461

ENSAPLT00000008604

60648193 - 60815817

167625