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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60693090_60794697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60693090 - 60794697

Intron Length:

101608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGTGTCAATC

Flanking Amino Acid:

GLRKYKKTSQRLRSLVKQLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.8

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.4

0.89

0.6

24.1

Minor 5ss

35.5

-1.6

3.2

47.7

Minor BPS

47.4

-0.2

2.3

65.51

Associated Gene:

Gene:

PDE1C

Ensembl Gene ID:

ENSAPLG00000008225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034604

60648357 - 60815817

167461

ENSAPLT00000008604

60648193 - 60815817

167625