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Intron Name: Anas_platyrhynchos_platyrhynchos_2_60693090_60815716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60693090 - 60815716

Intron Length:

122627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTCCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGTGTCAATC

Flanking Amino Acid:

IEKIWLRLRGLLRSLVKQLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.4

0.89

0.6

24.1

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

47.4

-0.2

2.3

65.51

Associated Gene:

Gene:

PDE1C

Ensembl Gene ID:

ENSAPLG00000008225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047205

60648193 - 60815817

167625