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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6084_10597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6084 - 10597

Intron Length:

4514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCCC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATTAAAGAACA

Flanking Amino Acid:

QQEITALDNKIHETIESINQ

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

54.4

42.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

-2.2

3.4

43.3

43.9

Minor BPS

44.2

-0.4

60.17

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008903

3822 - 61680

57859

ENSAPLT00000046030

3263 - 59790

56528

ENSAPLT00000020394

3263 - 88619

85357

ENSAPLT00000018278

3263 - 59790

56528