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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61015966_61017719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61015966 - 61017719

Intron Length:

1754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTCTTTTATA

Flanking Amino Acid:

ILLNGNNITMLVPGGEGPEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.1

0.79

0.7

80.6

31.1

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

67.6

0.55

1.5

76.04

35.6

Associated Gene:

Gene:

LSM5

Ensembl Gene ID:

ENSAPLG00000008171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008487

61015683 - 61021273

5591