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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61018474_61020204_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

61018474 - 61020204

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTGGACCTTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTTTCCTTGAAA

Flanking Amino Acid:

GTLLGFDDFVNMVLEDVTEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

65.9

0.36

59.6

41.4

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

81.1

0.97

1.2

87.98

28.7

Associated Gene:

Gene:

LSM5

Ensembl Gene ID:

ENSAPLG00000008171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008487

61015683 - 61021273

5591