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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61020301_61021227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61020301 - 61021227

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

TTTTAATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

TTNPSQLLPLELVDKCIGSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

53.6

45.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.1

0.83

0.8

35.3

Minor 5ss

33.2

-1.9

40.9

44.9

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

LSM5

Ensembl Gene ID:

ENSAPLG00000008171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008487

61015683 - 61021273

5591