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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61023904_61041000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61023904 - 61041000

Intron Length:

17097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TGCTTCCTATTT

Flanking Amino Acid:

VGFHHKKGCQVEFSYPPLMP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

81.1

0.7

0.9

81.2

36.5

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

48.9

-0

1.9

68.65

42.7

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187