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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61041122_61043411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61041122 - 61043411

Intron Length:

2290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TTTTTTTTCATA

Flanking Amino Acid:

LPDGAHNYQEDTVFFHLPPR

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

90.2

0.9

0.6

87.8

22.4

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

64.7

0.46

1.7

33.3

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187