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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61043498_61044814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61043498 - 61044814

Intron Length:

1317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AATACTCTAATA

Flanking Amino Acid:

VSCYRQIEAKALKVRQADIT

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

0.75

78.6

Major PPT

81.1

0.7

80.7

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

54.1

0.13

1.7

64.62

35.3

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187