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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61046180_61046809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61046180 - 61046809

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TCTTTGGTATCC

Flanking Amino Acid:

TSLEGSQVYLGLSPRDLVLH

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

75.1

0.57

66.3

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

42.3

-0.6

2.7

60.84

45.1

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008004

61023637 - 61061823

38187

ENSAPLT00000025875

61023637 - 61060823

37187