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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61046851_61047959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61046851 - 61047959

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

TCATTTACCATG

Flanking Amino Acid:

RDLVLHFRHKVLILFKLILL

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

78.8

38.3

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

48.4

-0.1

3.2

72.7

44.5

Minor BPS

37.5

-1.1

1.9

40.16

38.5

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008004

61023637 - 61061823

38187

ENSAPLT00000025875

61023637 - 61060823

37187