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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61047999_61051128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61047999 - 61051128

Intron Length:

3130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAATTT

5'SS Class:

major

3'SS Sequence:

CTTGCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTCTTG

Flanking Amino Acid:

LFKLILLEKKVLFYISPVNR

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

76.6

32.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

77.5

0.62

0.8

68.9

37.1

Minor 5ss

49.3

-0

2.9

73.4

43.4

Minor BPS

45.6

-0.4

3.6

70.91

42.8

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187