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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61052288_61055038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61052288 - 61055038

Intron Length:

2751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGG

5'SS Class:

major

3'SS Sequence:

TCTGTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATCCTCTAACA

Flanking Amino Acid:

YGMPLAIFTKGYLCLPYMAL

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

45.4

Major BPS

84.4

0.85

34.5

Major PPT

75.6

0.58

0.9

73.6

Minor 5ss

38.1

-1.3

2.9

48.8

Minor BPS

59.3

0.29

1.7

69.65

35.7

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187