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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61056121_61057524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61056121 - 61057524

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAAG

5'SS Class:

major

3'SS Sequence:

TTTAATCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATC

Flanking Amino Acid:

HALLAAVLQPDNEKTLSDFG

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

64.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.2

0.68

0.8

77.5

36.3

Minor 5ss

30.8

-2.2

3.2

46.4

Minor BPS

0.7

1.1

78.22

31.1

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187