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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61057643_61058618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61057643 - 61058618

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

KHPALAEVNSSHPFQGQYSV

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.6

0.78

0.7

77.6

31.1

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187