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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61058673_61060549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61058673 - 61060549

Intron Length:

1877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TCTTCAGTATCT

Flanking Amino Acid:

SVSDVKLRLSHSVQNSERGK

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

0.82

0.8

24.9

Major PPT

76.7

0.6

0.8

76.4

32.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

48.4

-0

2.4

76.82

45.6

Associated Gene:

Gene:

AVL9

Ensembl Gene ID:

ENSAPLG00000007697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025875

61023637 - 61060823

37187

ENSAPLT00000008004

61023637 - 61061823

38187