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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61072028_61072472_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
61072028 - 61072472

Intron Length:
445

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGAGTG

5'SS Class:
strong_major

3'SS Sequence:
CTTTGCATTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TTTGCATTACAG

Flanking Amino Acid:
QLYETACFLQVDDVLQRCRE

Intron Amino Acid Position:
113

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
69.9
41.1

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
80.3
0.68
0.9
73.2
36

Minor 5ss
32.6
-2
3.7
46.1
49.1

Minor BPS
47.9
-0.2
2.1
61.72
45.7

Associated Gene:

Gene:
KBTBD2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61070492 - 61076029
5538