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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61087154_61087688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61087154 - 61087688

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATTACATCAACT

Flanking Amino Acid:

HKPTLHKVLGGRLLRESMVI

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

38.1

Major BPS

73.9

0.59

30.2

Major PPT

81.3

0.7

0.8

82.4

27.9

Minor 5ss

43.2

-0.7

2.9

49.2

Minor BPS

0.39

1.9

81.47

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042456

61084318 - 61089007

4690

ENSAPLT00000035874

61083283 - 61090111

6829

ENSAPLT00000022202

61084318 - 61088113

3796