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Intron Name: Anas_platyrhynchos_platyrhynchos_2_611617_611807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

611617 - 611807

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

AGCTATTTAACT

Flanking Amino Acid:

SGWHHQVYNLEDTISINHNW

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

79.5

0.73

0.9

36.9

Major PPT

77.2

0.61

0.9

77.3

31.5

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

65.6

0.57

1.5

76.07

40.4

Associated Gene:

Gene:

JMJD4

Ensembl Gene ID:

ENSAPLG00000005164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005351

608044 - 613095

5052