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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61210319_61226916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61210319 - 61226916

Intron Length:

16598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTAATATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

VPVSVKVANIQNLKGVIVTL

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

74.8

38.9

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007136

61173467 - 61230864

57398