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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6146369_6146490_F

Intron Information:

Intron Rank:

136154

Intron Class:

major

Intron Phase:

Intron Coordinates:

6146369 - 6146490

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCAAA

U12 Branch Point Sequence:

TCTTGCAAAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.5

1.14

0.7

89.2

28.7

Major BPS

52.6

0.06

1.4

62.7

41.6

Major PPT

73.3

0.53

0.8

65.6

Minor 5ss

34.4

-1.8

45.2

Minor BPS

42.2

-0.5

2.4

59.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024981

6144354 - 6147443

3090