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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61507408_61508220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61507408 - 61508220

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.7

85.1

29.7

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

BMPER

Ensembl Gene ID:

ENSAPLG00000011811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012375

61507312 - 61661511

154200