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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61542739_61544248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61542739 - 61544248

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

ACAACAATAACA

Flanking Amino Acid:

NNPCITYQCQEGVIIQSEVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

85.1

0.79

0.8

80.1

31.9

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

47.5

-0.1

1.9

58.19

40.4

Associated Gene:

Gene:

BMPER

Ensembl Gene ID:

ENSAPLG00000011811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033179

61506232 - 61661511

155280

ENSAPLT00000012375

61507312 - 61661511

154200