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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61545254_61581856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61545254 - 61581856

Intron Length:

36603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTCTCTAACT

Flanking Amino Acid:

GNKCTKCSCIGGRTQCIQEV

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

0.99

1.5

96.75

Associated Gene:

Gene:

BMPER

Ensembl Gene ID:

ENSAPLG00000011811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033179

61506232 - 61661511

155280

ENSAPLT00000012375

61507312 - 61661511

154200