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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61586757_61589123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61586757 - 61589123

Intron Length:

2367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GATACTATACCA

Flanking Amino Acid:

VCKFGNKIFQDGEMWSSVNC

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

82.6

0.73

0.8

31.6

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

-0.2

1.9

59.19

40.1

Associated Gene:

Gene:

BMPER

Ensembl Gene ID:

ENSAPLG00000011811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033179

61506232 - 61661511

155280

ENSAPLT00000012375

61507312 - 61661511

154200