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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6171156_6178903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6171156 - 6178903

Intron Length:

7748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTCAAATTT

Flanking Amino Acid:

AVTPTTGAEELYRPLLKRYA

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

87.2

0.84

0.6

85.9

21.1

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

48.2

-0

2.1

41.3

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045187

6169858 - 6252219

82362

ENSAPLT00000026867

6169858 - 6247684

77827

ENSAPLT00000018671

6169858 - 6252219

82362

ENSAPLT00000013278

6169858 - 6251107

81250