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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61800278_61802382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61800278 - 61802382

Intron Length:

2105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TACTATCTAACG

Flanking Amino Acid:

AIKYSIVIILAFVLCWSPYF

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

74.6

0.55

0.9

68.1

37.5

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

49.3

-0.1

1.9

58.21

43.2

Associated Gene:

Gene:

NPSR1

Ensembl Gene ID:

ENSAPLG00000011804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012277

61746218 - 61802780

56563