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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61842273_61842783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61842273 - 61842783

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATAATT

Flanking Amino Acid:

LVVLGVIIKKAIKYLRWTLS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.2

29.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.9

0.67

0.9

37.3

Minor 5ss

36.3

-1.5

50.7

45.8

Minor BPS

69.6

0.69

1.5

85.51

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030872

61830363 - 61880356

49994

ENSAPLT00000028841

61831154 - 61880356

49203

ENSAPLT00000021295

61831154 - 61880356

49203

ENSAPLT00000041640

61831154 - 61880356

49203

ENSAPLT00000012021

61831154 - 61880356

49203

ENSAPLT00000039197

61831154 - 61880356

49203