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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6185443_6226955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6185443 - 6226955

Intron Length:

41513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TATTGCATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCAGTCTGATCT

Flanking Amino Acid:

IHAEKLGYKVMPRTRILATG

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

77.8

0.63

0.9

70.8

39.4

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

48.1

-0

1.8

64.91

45.5

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013278

6169858 - 6251107

81250

ENSAPLT00000045187

6169858 - 6252219

82362

ENSAPLT00000026867

6169858 - 6247684

77827

ENSAPLT00000018671

6169858 - 6252219

82362