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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61855397_61859263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61855397 - 61859263

Intron Length:

3867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CAGTTCTTATTT

Flanking Amino Acid:

VMCFFFNHGECTRVMWTPPL

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.1

0.81

0.7

85.4

28.1

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

0.3

1.6

68.04

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028841

61831154 - 61880356

49203

ENSAPLT00000021295

61831154 - 61880356

49203

ENSAPLT00000041640

61831154 - 61880356

49203

ENSAPLT00000012021

61831154 - 61880356

49203

ENSAPLT00000039197

61831154 - 61880356

49203

ENSAPLT00000030872

61830363 - 61880356

49994