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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61879768_61880268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61879768 - 61880268

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTTCTTTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

71.2

0.53

37.5

Major PPT

85.5

0.8

0.9

83.5

31.6

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

71.5

0.67

1.1

79.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030872

61830363 - 61880356

49994

ENSAPLT00000028841

61831154 - 61880356

49203

ENSAPLT00000021295

61831154 - 61880356

49203

ENSAPLT00000041640

61831154 - 61880356

49203

ENSAPLT00000012021

61831154 - 61880356

49203

ENSAPLT00000039197

61831154 - 61880356

49203