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Intron Name: Anas_platyrhynchos_platyrhynchos_2_61966460_61966859_R

Intron Information:

Intron Rank:

135508

Intron Class:

major

Intron Phase:

Intron Coordinates:

61966460 - 61966859

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCCTG

5'SS Class:

major

3'SS Sequence:

TTGTATGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTGTATGCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

56.6

47.8

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

67.7

0.4

1.1

62.6

42.9

Minor 5ss

40.5

-1.1

3.3

56.5

47.7

Minor BPS

45.9

-0.3

2.3

64.22

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046287

61965357 - 61967665

2309

ENSAPLT00000038266

61965357 - 61967665

2309

ENSAPLT00000028952

61944771 - 61967665

22895