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Intron Name: Anas_platyrhynchos_platyrhynchos_2_622676_623237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

622676 - 623237

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTTCCTTTATC

Flanking Amino Acid:

LESLQRYLEKALKSSLHPLG

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

79.3

0.66

0.9

35.4

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

78.4

0.88

1.5

86.75

30.6

Associated Gene:

Gene:

ALS2CL

Ensembl Gene ID:

ENSAPLG00000005280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022344

616350 - 641213

24864

ENSAPLT00000019967

616350 - 658098

41749

ENSAPLT00000005504

616350 - 658098

41749

ENSAPLT00000038866

616350 - 640574

24225