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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6228486_6230975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6228486 - 6230975

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGAGCC

5'SS Class:

major

3'SS Sequence:

TTCCTTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGTTCCTTGATA

Flanking Amino Acid:

STVAGNNGNLGFYFDVMEIT

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

59.6

38.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.2

0.61

0.9

72.2

Minor 5ss

37.3

-1.4

3.3

44.2

Minor BPS

80.9

0.97

83.25

30.5

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026867

6169858 - 6247684

77827

ENSAPLT00000018671

6169858 - 6252219

82362

ENSAPLT00000013278

6169858 - 6251107

81250

ENSAPLT00000045187

6169858 - 6252219

82362