Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_62363367_62381099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62363367 - 62381099

Intron Length:

17733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

TCTCTCTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

ELVDREALEKFCMELNQPTL

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

77.8

31.4

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

80.9

0.69

0.7

73.7

31.4

Minor 5ss

41.2

-1

2.5

45.5

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

EEPD1

Ensembl Gene ID:

ENSAPLG00000009672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023374

62329508 - 62390544

61037

ENSAPLT00000010097

62329508 - 62390858

61351