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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6236717_6241581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6236717 - 6241581

Intron Length:

4865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTATGTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTGGTTTGATCT

Flanking Amino Acid:

GAYAPIDYSDGSGMNLLQIW

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

38.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.3

0.57

0.9

69.8

36.4

Minor 5ss

33.1

-1.9

3.1

38.5

40.7

Minor BPS

48.1

-0

1.8

67.58

43.9

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013278

6169858 - 6251107

81250

ENSAPLT00000045187

6169858 - 6252219

82362

ENSAPLT00000026867

6169858 - 6247684

77827

ENSAPLT00000018671

6169858 - 6252219

82362