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Intron Name: Anas_platyrhynchos_platyrhynchos_2_62401577_62403617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62401577 - 62403617

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

ATGAGGTAAAAA

Flanking Amino Acid:

DFHLLTALGKGKSWNLKAGQ

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

53.6

0.09

59.9

32.5

Major PPT

73.2

0.52

1.7

36.6

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

36.6

-1

2.4

47.27

42.6

Associated Gene:

Gene:

KIAA0895

Ensembl Gene ID:

ENSAPLG00000009565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043910

62400698 - 62425384

24687

ENSAPLT00000027447

62399864 - 62425384

25521