Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_62408884_62419841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62408884 - 62419841

Intron Length:

10958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

TTGTATTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTGTATTTTATA

Flanking Amino Acid:

SQASDRFLKQSINIMERTLQ

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

81.5

0.71

0.8

76.7

37.2

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

53.3

0.1

1.8

67.51

39.1

Associated Gene:

Gene:

KIAA0895

Ensembl Gene ID:

ENSAPLG00000009565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027447

62399864 - 62425384

25521

ENSAPLT00000009954

62396768 - 62425384

28617

ENSAPLT00000043910

62400698 - 62425384

24687