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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6245503_6246892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6245503 - 6246892

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGC

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATGGTATTAATA

Flanking Amino Acid:

PELPLHQLLKACFAVSNSPI

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.7

39.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

84.3

0.77

0.9

76.9

42.1

Minor 5ss

37.1

-1.5

3.3

50.7

45.8

Minor BPS

52.4

0.07

1.7

62.04

38.7

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045187

6169858 - 6252219

82362

ENSAPLT00000026867

6169858 - 6247684

77827

ENSAPLT00000018671

6169858 - 6252219

82362

ENSAPLT00000013278

6169858 - 6251107

81250