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Intron Name: Anas_platyrhynchos_platyrhynchos_2_62477804_62480483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62477804 - 62480483

Intron Length:

2680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGCCAT

U12 Branch Point Sequence:

CCATGCAGAGCT

Flanking Amino Acid:

DNLHDRYHPLGQLNRDITYS

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

48.8

-0

1.5

58.2

48.3

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

39.5

-0.7

2.2

54.53

46.6

Associated Gene:

Gene:

AOAH

Ensembl Gene ID:

ENSAPLG00000008623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026098

62466584 - 62539576

72993

ENSAPLT00000021042

62466544 - 62539576

73033

ENSAPLT00000018455

62466544 - 62539576

73033

ENSAPLT00000009046

62466544 - 62540211

73668

ENSAPLT00000033895

62466544 - 62528325

61782