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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6250109_6251024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6250109 - 6251024

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

CTAAATTTACCA

Flanking Amino Acid:

VHFDKDLPEFKTQGGAYVHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

82.3

31.4

Major BPS

0.5

0.9

61.4

35.9

Major PPT

81.8

0.72

0.7

77.6

30.8

Minor 5ss

44.4

-0.6

3.4

64.7

Minor BPS

47.5

-0.1

1.8

57.59

41.8

Associated Gene:

Gene:

XYLB

Ensembl Gene ID:

ENSAPLG00000012716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045187

6169858 - 6252219

82362

ENSAPLT00000018671

6169858 - 6252219

82362